Volatile:MetaboliteDistribution
From Metabolomics.JP
(Difference between revisions)
m (New page: {{#def:stat| {{#lua: local T = {} total = 0 for genus in stdin:gmatch("&&([%a]+) [-%a%. ]+&&[%a%d]+") do total = total + 1 if (T[genus] == null) then T[genus] = 1 else T[genu...) |
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| Line 13: | Line 13: | ||
|{{#SearchLine:{{{1|FL63}}}|Reference}} }} | |{{#SearchLine:{{{1|FL63}}}|Reference}} }} | ||
}} | }} | ||
| + | |||
| + | {| | ||
| + | |- | ||
| + | | | ||
| + | {{#graph:pie|size=400x200;margin=0,0,0,0;title=Top 5 Families for class {{{1}}};legend=0.65x0.45;label=; | ||
| + | {{#lua: | ||
| + | T = {} | ||
| + | total = 0 | ||
| + | tfam = 0 | ||
| + | for family, num in stdin:gmatch("([%a]+) ([%d]+)") do | ||
| + | total = total + num | ||
| + | if (T[family] == null) then T[family] = tonumber(num) tfam = tfam + 1 else T[family] = T[family] + num end | ||
| + | end | ||
| + | S = {} | ||
| + | I = {} | ||
| + | for k,v in pairs(T) do | ||
| + | if (S[v] == null) then S[v] = { k } table.insert(I,v) else table.insert(S[v], k) end | ||
| + | end | ||
| + | table.sort(I) | ||
| + | for i=table.getn(I), math.max(table.getn(I)-4,1),-1 do | ||
| + | T = S[I[i]] | ||
| + | print(table.concat(T," ").."="..I[i]*table.getn(T)..";") | ||
| + | total=total-(I[i]*table.getn(T)) | ||
| + | end | ||
| + | print("others="..total) | ||
| + | | {{#repeat:Stats/Family/GetFamilyName|1|{{#var:stat}} }} | ||
| + | }} | ||
| + | }} | ||
| + | | The number in each family is counted as the number of genera (not species) listed in our registered references. Each reference record is accessible by clicking the link in compound pages. The taxonomy follows the [[Doc:Scientific_name|APG-II classification]]. | ||
| + | |} | ||
==Family Distribution== | ==Family Distribution== | ||
| Line 35: | Line 65: | ||
print('{{#bar:}}-') | print('{{#bar:}}-') | ||
T = S[I[i]] | T = S[I[i]] | ||
| + | if (table.getn(T) == 1) then | ||
print("{{#bar:}}"..I[i].." ("..string.format("%.2f",100*I[i]/total).."%){{#bar:}}{{#bar:}}") | print("{{#bar:}}"..I[i].." ("..string.format("%.2f",100*I[i]/total).."%){{#bar:}}{{#bar:}}") | ||
| + | else | ||
| + | print("{{#bar:}}"..I[i].." ("..string.format("%.2f",100*I[i]/total).."%) each {{#bar:}}{{#bar:}}") | ||
| + | end | ||
for j,w in pairs(T) do | for j,w in pairs(T) do | ||
print("[[:Category:"..w.."{{#bar:}}"..w.."]]; ") | print("[[:Category:"..w.."{{#bar:}}"..w.."]]; ") | ||
| Line 84: | Line 118: | ||
print(k.." "..table.concat(T[k], "; ")) | print(k.." "..table.concat(T[k], "; ")) | ||
end | end | ||
| − | |{{#SearchLine:FL63|Reference}} }} | + | |{{#SearchLine:{{{1|FL63}}}|Reference}} }} |
}} | }} | ||
Latest revision as of 10:38, 11 December 2009
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The number in each family is counted as the number of genera (not species) listed in our registered references. Each reference record is accessible by clicking the link in compound pages. The taxonomy follows the APG-II classification. |
[edit] Family Distribution
| #metabolite | Total 0 metabolites in 0 families |
|---|
[edit] Order Distribution
| #metabolite | Total 0 metabolites in 0 orders |
|---|
