PKS:An01g06950
From Metabolomics.JP
(Difference between revisions)
m (moved PKS:ANig03 to PKS:An01g06950) |
|||
| (2 intermediate revisions by one user not shown) | |||
| Line 10: | Line 10: | ||
|geneName= | |geneName= | ||
|MAPSI=KS-AT-DH-KR | |MAPSI=KS-AT-DH-KR | ||
| − | |CDD=KS-AT-DH- | + | |CDD=KS-AT-DH-ER-KR |
| − | |class= | + | |class=RPKS |
|reliability= | |reliability= | ||
|description=hypothetical protein An01g06950 [Aspergillus niger] | |description=hypothetical protein An01g06950 [Aspergillus niger] | ||
| − | |information=Title: strong similarity to polyketide synthase FUM5 - Gibberella moniliformis; Remark: the nearby located ORF An01g06930 is also homolog to polyketide synthase FUM5.; (2.3.1.-) | + | |information=No ACP domain. CCD domain structure:KS-AT-DH-MDR-KR. ER is one of MDR family. CCD of ANig03 presents here as KS-AT-DH-ER-KR(Title: strong similarity to polyketide synthase FUM5 - Gibberella moniliformis; Remark: the nearby located ORF An01g06930 is also homolog to polyketide synthase FUM5.; (2.3.1.-)) |
|length=2282 | |length=2282 | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Latest revision as of 16:06, 23 April 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Aspergillus niger CBS 513.88 (GenBank XP_001389118) all species | |||
|---|---|---|---|
| Class | RPKS (length: 2282) all classes Class 26.R-PKS_I(2) in KS domain phylogeny | Reliability | |
| Product | GeneName | ||
| UniProt,UniRef90 | - , - | UniRef50 | - |
| Domain by MAPSI | KS-AT-DH-KR | ||
| Domain by CDD | KS-AT-DH-ER-KR | ||
| Domain by ITER-DB | {{{ITERDB}}} | ||
| Estimated Domain | |||
| Description | hypothetical protein An01g06950 [Aspergillus niger] | ||
| Information | No ACP domain. CCD domain structure:KS-AT-DH-MDR-KR. ER is one of MDR family. CCD of ANig03 presents here as KS-AT-DH-ER-KR(Title: strong similarity to polyketide synthase FUM5 - Gibberella moniliformis; Remark: the nearby located ORF An01g06930 is also homolog to polyketide synthase FUM5.; (2.3.1.-)) | ||
| References | |||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
