PKS:Fung004
From Metabolomics.JP
(Difference between revisions)
| (2 intermediate revisions by one user not shown) | |||
| Line 9: | Line 9: | ||
|CDD=KS-AT-PP-PP-TE | |CDD=KS-AT-PP-PP-TE | ||
|class=NRPKS | |class=NRPKS | ||
| − | |reliability= | + | |reliability=identified |
|description=polyketide synthase [Nodulisporium sp. ATCC74245] | |description=polyketide synthase [Nodulisporium sp. ATCC74245] | ||
| − | |information=involved in melanin biosynthesis in Colletotrichum lagenarium.LOCUS=AF151533_1. | + | |information=involved in melanin biosynthesis in Colletotrichum lagenarium.LOCUS=AF151533_1. Inferred domain architecture: SAT-KS-AT-PT-ACP-ACP-TE/CLC |
|length=2159 | |length=2159 | ||
| − | |references=\*Varga.+2003$~\*Li.+2010$~\*Ahuja.+2012$ | + | |references=\*Varga.+2003$~\*Li.+2010$~\*Ahuja.+2012$~\*Fulton.+1999$ |
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Latest revision as of 01:15, 10 May 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Nodulisporium sp. ATCC74245 (GenBank AAD38786) all species | |||
|---|---|---|---|
| Class | NRPKS (length: 2159) all classes Class 11.NRPKS_I(4a)melanin in KS domain phylogeny | Reliability | identified |
| Product | THN | GeneName | pks1 |
| UniProt,UniRef90 | [1] , [2] | UniRef50 | [3] |
| Domain by MAPSI | KS-AT-ACP-ACP-CYC | ||
| Domain by CDD | KS-AT-PP-PP-TE | ||
| Domain by ITER-DB | {{{ITERDB}}} | ||
| Estimated Domain | |||
| Description | polyketide synthase [Nodulisporium sp. ATCC74245] | ||
| Information | involved in melanin biosynthesis in Colletotrichum lagenarium.LOCUS=AF151533_1. Inferred domain architecture: SAT-KS-AT-PT-ACP-ACP-TE/CLC | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
