PKS:Fung021

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Line 7: Line 7:
 
|geneName=pks16
 
|geneName=pks16
 
|MAPSI=KS-AT-ACP-ACP
 
|MAPSI=KS-AT-ACP-ACP
|CDD=KS-AT-PP-PP-ME-(EL)(AD3)
+
|CDD=KS-AT-PP-PP-ME-(EL/AD3)
 
|class=PRPKS
 
|class=PRPKS
 
|reliability=putative
 
|reliability=putative

Latest revision as of 03:10, 13 April 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Botryotinia fuckeliana (GenBank AAR90252) all species
Class PRPKS (length: 2411) all classes   Class 19.NRPKS_III(1) in KS domain phylogeny Reliability putative
Product GeneName pks16
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP-PP-ME-(EL/AD3)

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description polyketide synthase [Botryotinia fuckeliana]
Information
References
  • Fisch KM, Gillaspy AF, Gipson M, Henrikson JC, Hoover AR, Jackson L, Najar FZ, Wagele H, Cichewicz RH: Chemical induction of silent biosynthetic pathway transcription in aspergillus niger. J Ind Microbiol Biotechnol 36(9):1199-1213, 2009
  • Valarmathi R, Hariharan GN, Venkataraman G, Parida A: Characterization of a non-reducing polyketide synthase gene from lichen dirinaria applanata. Phytochemistry 70(6):721-729, 2009
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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