PKS:An08g03790

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|MAPSI=KS-AT-DH-KR-ACP
 
|MAPSI=KS-AT-DH-KR-ACP
 
|CDD=KS-AT-DH-ME-KR-PP-Con-EntF
 
|CDD=KS-AT-DH-ME-KR-PP-Con-EntF
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|class=NRPS-PKS
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|class=PKS-NRPS
 
|reliability=
 
|reliability=
 
|description=hypothetical protein An08g03790 [Aspergillus niger]
 
|description=hypothetical protein An08g03790 [Aspergillus niger]

Latest revision as of 21:19, 16 December 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD) 		Domains
(by MAPSI)
Aspergillus niger CBS 513.88 (GenBank XP_001392496) all species
Class PKS-NRPS (length: 3605) all classes   Class 29.NRPS-PKS_II in KS domain phylogeny Reliability
Product GeneName
UniProt,UniRef90 A2QTH2 , - UniRef50 -
Domain by MAPSI KS-AT-DH-KR-ACP

(notation help / all patterns)

Domain by CDD KS-AT-DH-ME-KR-PP-Con-EntF

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description hypothetical protein An08g03790 [Aspergillus niger]
Information Possible NRPS-PKS domain structure:KS-AT-CA. Title: strong similarity to lovastatin nonaketide synthase lovB - Aspergillus terreus; Function: like fatty acids-polyketides are assembled by successive decarboxylative condensations of simple precursors.; Function: many polyketides are antibiotics.; Function: polyketide synthases catalyze the assembly of complex natural products from simple precursors such as propionyl-CoA and methylmalonyl-CoA in a biosynthetic process that closely parallels fatty acid biosynthesis.; Function: whereas the intermediates in fatty acid biosynthesis are fully reduced to generate unfunctionalized alkyl chains-the intermediates in polyketide biosynthesis may be only partially processed-giving rise to complex patterns of functional groups.; Remark: polyketide synthases are commercially valuable enzyme.?
References
  • Pel HJ, de Winde JH, Archer DB, Dyer PS, Hofmann G, Schaap PJ, Turner G, de Vries RP, Albang R, Albermann K, Andersen MR, Bendtsen JD, Benen JA, van den Berg M, Breestraat S, Caddick MX, Contreras R, Cornell M, Coutinho PM, Danchin EG, Debets AJ, Dekker P, van Dijck PW, van Dijk A, Dijkhuizen L, Driessen AJ, d'Enfert C, Geysens S, Goosen C, Groot GS, de Groot PW, Guillemette T, Henrissat B, Herweijer M, van den Hombergh JP, van den Hondel CA, van der Heijden RT, van der Kaaij RM, Klis FM, Kools HJ, Kubicek CP, van Kuyk PA, Lauber J, Lu X, van der Maarel MJ, Meulenberg R, Menke H, Mortimer MA, Nielsen J, Oliver SG, Olsthoorn M, Pal K, van Peij NN, Ram AF, Rinas U, Roubos JA, Sagt CM, Schmoll M, Sun J, Ussery D, Varga J, Vervecken W, van de Vondervoort PJ, Wedler H, Wosten HA, Zeng AP, van Ooyen AJ, Visser J, Stam H: Genome sequencing and analysis of the versatile cell factory aspergillus niger cbs 513.88. Nat Biotechnol 25(2):221-231, 2007
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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