PKS:AN2035

Latest revision as of 12:28, 28 March 2013

Aspergillus nidulans FGSC A4 (GenBank XP_659639) all species
Class	RPKS (length: 2544) all classes Class in KS domain phylogeny	Reliability
Product		GeneName	pkhB
UniProt,UniRef90	C8VLG3 , C8VLG3	UniRef50	Q4WF41
Domain by MAPSI	KS-AT-DH-ER-KR-ACP (notation help / all patterns)
Domain by CDD	KS-AT-DH-ME-ER-KR-PP (notation help / all patterns)
Domain by ITER-DB	{{{ITERDB}}} (notation help / all patterns)
Estimated Domain
Description	hypothetical protein AN2035.2 [Aspergillus nidulans FGSC A4]
Information	Predicted cluster size: 10 genes.
References	Andersen M R, Nielsen J B, Klitgaard A, Petersen L M, Zachariasen M, Hansen T J, Blicher L H, Gotfredsen C H, Larsen T O, Nielsen K F, Mortensen U H: Accurate prediction of secondary metabolite gene clusters in filamentous fungi. Proc Natl Acad Sci U S A 110(1): E99-107. 2013
Link	AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

@@ Line 3: / Line 3: @@
 |species=Aspergillus nidulans FGSC A4
 |taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Emericella
-|product=osellinaldehyde; 3-(2,4-dihydroxy-6-methylbenzyl)-orsellinaldehyde
+|product=
-|GenBank=XP_659636
+|GenBank=XP_659639
-|UniProt=C8VLG0
+|UniProt=C8VLG3
-|UniRef90=C8VLG0
+|UniRef90=C8VLG3
-|UniRef50=C8VLG0
+|UniRef50=Q4WF41
-|geneName=pks17(pkhA)
+|geneName=pkhB
-|MAPSI=KS-AT-ACP
+|MAPSI=KS-AT-DH-ER-KR-ACP
-|CDD=KS-AT-PP-TE
+|CDD=KS-AT-DH-ME-ER-KR-PP
-|ITERDB=ACP-KS-AT-ACP
+|class=RPKS
-|InferredDomain=SAT-KS-AT-PT-ACP-ME-R
+|reliability=
-|class=NRPKS
+|description=hypothetical protein AN2035.2 [Aspergillus nidulans FGSC A4]
-|reliability=Verified
-|description=hypothetical protein AN2032.2 [Aspergillus nidulans FGSC A4]
 |information=Predicted cluster size: 10 genes.
-|references=\*Ahuja.+2012$~\*Andersen.+2013$
+|length=2544
-|length=2221
+|references=\*Andersen.+2013$
 }}
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