PKS:AN7071

From Metabolomics.JP
Jump to: navigation, search
Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus nidulans FGSC A4 (GenBank XP_664675) all species
Class NRPKS (length: 1870) all classes   Class in KS domain phylogeny Reliability verified
Product alternariol, dehydrocitreoisocoumarin, dehydrocitreoisocoumarin, 6, 8-dihydroxy-3-(2-oxopropyl)-isocoumarin, 6, 8-dihydroxy-3-(2-hyfroxy-propyl)-isocoumarin GeneName pks12(pkgA)
UniProt,UniRef90 C8VB30 , C8VB30 UniRef50 Q2U886
Domain by MAPSI KS-AT-ACP

(notation help / all patterns)

Domain by CDD KS-AT-(PP)

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP
Description hypothetical protein AN7071.2 [Aspergillus nidulans FGSC A4]
Information The PP domain of AN7071 from CCD is incomplete.
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Andersen M R, Nielsen J B, Klitgaard A, Petersen L M, Zachariasen M, Hansen T J, Blicher L H, Gotfredsen C H, Larsen T O, Nielsen K F, Mortensen U H: Accurate prediction of secondary metabolite gene clusters in filamentous fungi. Proc Natl Acad Sci U S A 110(1): E99-107. 2013
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

Personal tools
Namespaces

Variants
Actions
Navigation
metabolites
Toolbox