P450:CYP97
From Metabolomics.JP
(Difference between revisions)
(New page: =97 Family= {{P450/Table/Header| {{#repeat:P450/Table/Row|1| &&CYP97A1&&Cicer arietinum (chickpea)&&no accession number &&CYP97A2X&&see CYP97C1&& &&CYP97A3&&Arabidopsis thaliana&&GenEMBL ...) |
(New page: =97 Family= {{P450/Table/Header| {{#repeat:P450/Table/Row|1| &&CYP97A1&&Cicer arietinum (chickpea)&&no accession number &&CYP97A2X&&see CYP97C1&& &&CYP97A3&&Arabidopsis thaliana&&GenEMBL ...) |
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=97 Family= | =97 Family= | ||
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&&CYP97A1&&Cicer arietinum (chickpea)&&no accession number | &&CYP97A1&&Cicer arietinum (chickpea)&&no accession number | ||
&&CYP97A2X&&see CYP97C1&& | &&CYP97A2X&&see CYP97C1&& | ||
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&&CYP97F4&&Ectocarpus siliculosis (brown algae)&&No accession number | &&CYP97F4&&Ectocarpus siliculosis (brown algae)&&No accession number | ||
&&CYP97&&like Skeletonema costatum (CCMP 1332) (a marine diatom, 1st Stramenopile P450)&&No accession number | &&CYP97&&like Skeletonema costatum (CCMP 1332) (a marine diatom, 1st Stramenopile P450)&&No accession number | ||
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}} | }} | ||
Latest revision as of 20:00, 21 June 2009
| P450 Top (P450トップ) |
P450 Index (P450一覧) |
Arabidopsis (シロイヌナズナ) |
Oryza (イネ) |
Species-sequence information is taken from Cytochrome P450 Homepage by Dr. Nelson. (last update 2009/06/20)
[edit] 97 Family
| ID | Species | Family | Order | Description
|
|---|---|---|---|---|
| CYP97A1 |
|
Fabaceae | Fabales | no accession number |
| CYP97A2X | ||||
| CYP97A3 | Brassicaceae | Brassicales | GenEMBL AC079041 Clone F56M6 | |
| CYP97A4 |
|
Poaceae | Poales | See rice page |
| CYP97A5 |
|
See Chlamydomonas page matches scaffold 104 of version 2 JGI assembly | ||
| CYP97A6 |
|
See Chlamydomonas page | ||
| CYP97A7 |
|
Salicaceae | Malpighiales | scaffold_87 (+) 1294208-1317779 79% to 97A3, 73% TO 97A4 |
| CYP97A8 |
|
Funariaceae | Funariales | Trace archive 756728820 838595928 1017487654 1006241304 |
| CYP97A9 | Pinaceae | Coniferales | GenEMBL DR025429 (EST) | |
| CYP97A10 |
|
Fabaceae | Fabales | GenEMBL DQ335815, AC148994.3, AC124218.18, |
| CYP97A10 |
|
Fabaceae | Fabales | AC148994.3 genomic complete gene, also AC124218.18 |
| CYP97A10 |
|
Fabaceae | Fabales | DQ394572, GSS ED632499.1 |
| CYP97A11 |
|
Vitaceae | Vitales | AM476239.2 |
| CYP97A12 | Caricaceae | Brassicales | supercontig_123:219372,247386 | |
| CYP97A13 |
|
JGI model fgenesh4_pg.C_scaffold_106000021$$Volca1 | ||
| CYP97A14 |
|
Selaginellaceae | Selaginellales | Confidential |
| CYP97A15 | estExt_fgenesh1_pm.C_Chr_13.00010043$$Ostta4 at JGI | |||
| CYP97A15 | estExt_GenewiseEukaryote.C_Chr_130084$$Ost9901_3at JGI | |||
| CYP97A16 | Poaceae | Poales | EU956753 | |
| CYP97A17 |
|
estExt_Genewise1.C_50257$$MicpuC2 at JGI | ||
| CYP97A18 |
|
EuGene.0600010504$$MicpuN3 at JGI | ||
| CYP97A |
|
Lauraceae | Laurales | GenEMBL CK751827.1 |
| CYP97A |
|
CX043342.1 | ||
| CYP97A | GenEMBL CK752343 EST | |||
| CYP97A |
|
Rubiaceae | Gentianales | DV709714.1 |
| CYP97A |
|
Ranunculaceae | Ranunculales | DT739107.1 |
| CYP97A |
|
Asteraceae | Asterales | DY823345.1 |
| CYP97A |
|
Cucurbitaceae | Cucurbitales | DN909328.1 |
| CYP97A |
|
Myrtaceae | Myrtales | CD668366.1 |
| CYP97A |
|
Ranunculaceae | Ranunculales | DT739107.1 |
| CYP97A |
|
Actinidiaceae | Ericales | FG470555.1 88% to 97A7 |
| CYP97B1 |
|
Fabaceae | Fabales | GenEMBL Z49263(1926bp) |
| CYP97B2 |
|
Fabaceae | Fabales | GenEMBL AF022457 (1831bp) |
| CYP97B3 | Brassicaceae | Brassicales | GenEMBL Z97337 | |
| CYP97B4 |
|
Poaceae | Poales | See rice page |
| CYP97B5 |
|
Rosaceae | Rosales | GenEMBL BQ106584 EST |
| CYP97B6 |
|
GenEMBL AV390436 | ||
| CYP97B7 |
|
Salicaceae | Malpighiales | LG_VI (-) 451262-445524 75% to 97B3 79% to 97B4 |
| CYP97B8 |
|
Funariaceae | Funariales | ESTs BJ206405.1 BJ200097.1 BJ187250.1 BJ590155 BJ606606 |
| CYP97B9 | Pinaceae | Coniferales | GenEMBL CF395695 CF395659 | |
| CYP97B10 | Pinaceae | Coniferales | GenEMBL CO227615 | |
| CYP97B11 |
|
GenEMBL AJ919695 | ||
| CYP97B12 |
|
Ginkgoaceae | Ginkgoales | GenEMBL AY601887 |
| CYP97B13 |
|
Fabaceae | Fabales | GenEMBL AC142526.5, GenPept ABE94036 |
| CYP97B14 |
|
Pedaliaceae | Lamiales | No accession number |
| CYP97B15 |
|
Vitaceae | Vitales | AM472981.1 partial |
| CYP97B16 | Caricaceae | Brassicales | supercontig_8:2049746,2058632 | |
| CYP97B17 |
|
JGI model e_gw1.51.4.1$$Volca1 | ||
| CYP97B18 |
|
Selaginellaceae | Selaginellales | Confidential |
| CYP97B (frag.) |
|
Rubiaceae | Gentianales | DQ124079 |
| CYP97B (frag.) |
|
Plumbaginaceae | Caryophyllales | DW719276 |
| CYP97B (frag.) | Malvaceae | Malvales | DX398554 | |
| CYP97C1 | Brassicaceae | Brassicales | GenEMBL AL132958 | |
| CYP97C2 |
|
Poaceae | Poales | |
| CYP97C3 |
|
See Chlamydomonas page | ||
| CYP97C4 |
|
Salicaceae | Malpighiales | scaffold_28 (-) 2755358-2750774 79% to 97C1 76% to 97C2 rice |
| CYP97C5 |
|
Funariaceae | Funariales | GenEMBL BJ955568 opposite end BJ944795 |
| CYP97C6 | Pinaceae | Coniferales | GenEMBL DR386888 | |
| CYP97C7 | Pinaceae | Coniferales | GenEMBL DR505085 | |
| CYP97C8 | Pinaceae | Coniferales | GenEMBL DR580435 | |
| CYP97C9 |
|
Apiaceae | Apiales | GenEMBL DQ192196.1 |
| CYP97C10 |
|
Fabaceae | Fabales | GenEMBL DQ335801, GenPept ABC59096 |
| CYP97C11 | Solanaceae | Solanales | BT012891 | |
| CYP97C12 |
|
Vitaceae | Vitales | AM463116.2, CAN65775.1 |
| CYP97C13 | Caricaceae | Brassicales | supercontig_5:976907,981943 | |
| CYP97C14 |
|
JGI model estExt_Genewise1Plus.C_520019$$Volca1 | ||
| CYP97C15 |
|
Selaginellaceae | Selaginellales | Confidential |
| CYP97C16 |
|
Fabaceae | Fabales | GenEMBL AI736606, BI701721, EE400128.1, EV273645.1 |
| CYP97C17 |
|
Fabaceae | Fabales | Gm0225x00049:peptide |
| CYP97C18 | gw1.09.00.100.1$$Ostta4 at JGI | |||
| CYP97C18 | eugene.0900010237$$Ost9901_3 at JGI | |||
| CYP97C18 |
|
See Micromonas page | ||
| CYP97C18 |
|
See Micromonas page | ||
| CYP97C |
|
Malvaceae | Malvales | GenEMBL AI731695 |
| CYP97C |
|
Lamiaceae | Lamiales | CV171904.1 |
| CYP97C (frag.) |
|
Asteraceae | Asterales | DQ160157 |
| CYP97C (frag.) | GenEMBL AW097933 ga03g06.y1 Moss EST library | |||
| CYP97D1X |
|
|||
| CYP97E1 |
|
No accession number | ||
| CYP97E1 |
|
GenEMBL AF459441 | ||
| CYP97E2 |
|
No accession | ||
| CYP97E3 |
|
No accession number | ||
| CYP97E4 |
|
|||
| CYP97E5 | estExt_gwp_GeneWisePlus.C_Chr_01.00010469$$Ostta4 at JGI | |||
| CYP97E5 | eugene.0100010571$$Ost9901_3 | |||
| CYP97E5 |
|
See Micromonas page | ||
| CYP97E5 |
|
See Micromonas page | ||
| CYP97E6 | estExt_fgenesh1_pm.C_Chr_15.00010014$$Ostta4 | |||
| CYP97E6 | fgenesh1_pg.C_Chr_14000053$$Ost9901_3 | |||
| CYP97E6 |
|
See Micromonas page | ||
| CYP97E6 |
|
See Micromonas page | ||
| CYP97F1 |
|
No accession | ||
| CYP97F2 | GenEMBL EC678021.1 | |||
| CYP97F3 |
|
|||
| CYP97F4 |
|
No accession number | ||
| CYP97 |
|
No accession number
|
[edit] Functions
- CYP97A, B, possible carotenoid hydroxylase
- CYP97C, carotenoid epsilon-ring hydroxylase
[edit] Links
- CYPedia CYP97 Functional Prediction (Cytochrome P450 Expression Database using Arabidopsis) by IBMP Strasbourg.
